BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007D10LP1|AL425692
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1144 0.0
3x_Contig1300 222 8e-58
>3x_Contig1493
Length = 12243
Score = 1144 bits (577), Expect = 0.0
Identities = 639/657 (97%), Gaps = 2/657 (0%)
Strand = Plus / Plus
Query: 1 actttaatgtcctattattaaactttatcttttattataacttcattaaccatctcatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11580 actttaatgtcctattattaaactttatcttttattataacttcattaaccatctcatac 11639
Query: 61 tctccatacttgttcaggacatcttaactttttaaggtgttttttttaataaagtcagta 120
|||||||||| |||| |||| |||||||||| | |||||||||||||| ||| ||
Sbjct: 11640 actccatactttttcattacataaaaactttttaattttttttttttaataaattcatta 11699
Query: 121 ctactcctttgaataaaaagataccagttaaaaacccttttttttttttaatactattat 180
|||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 11700 ctactccttttaataaaaatataccatttaaaaacccttttttttttttaatactattat 11759
Query: 181 taattttttttattctttcatttactcttcttccacttaccttccacctcaagatggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11760 taattttttttattctttcatttactcttcttccacttaccttccacctcaagatggtca 11819
Query: 241 gtattacctt-cacgtactataggtcatctcagttctatgactgttcctgagtaagatat 299
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 11820 gtattaccttgcacgtactataggtcatctcagttctatcactgttcctgagtaagatat 11879
Query: 300 cgttctgatttttgttaagaaatcaaaagaaaacacagatccgaagtgaatgaaggaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11880 cgttctgatttttgttaagaaatcaaaagaaaacacagatccgaagtgaatgaaggaaaa 11939
Query: 360 atgaaagaaaattagaaaatggtatatccatcaaaactgtttcaaggatatttctaactc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11940 atgaaagaaaattagaaaatggtatatccatcaaaactgtttcaaggatatttctaactc 11999
Query: 420 gatagaggagaccgagtaaaagacatcgggcgacgaaaaaaagttgattatataaatctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12000 gatagaggagaccgagtaaaagacatcgggcgacgaaaaaaagttgattatataaatctt 12059
Query: 480 atagttcgtatttttaagcaatgataatgtcacaataagagatactattccaacctcttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12060 atagttcgtatttttaagcaatgataatgtcacaataagagatactattccaacctcttc 12119
Query: 540 cctcgtatgagaatgatgcaatctcaacaatgttacctcaaaatcggaaatgcgtctaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12120 cctcgtatgagaatgatgcaatctcaacaatgttacctcaaaatcggaaatgcgtctaaa 12179
Query: 600 cacaaaccttcatatcataattgactgaagtttatatagcgcc-aatgtactagttc 655
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 12180 cacaaaccttcatatcataattgactgaagtttatatagcgccgaatgtactagttc 12236
>3x_Contig1300
Length = 6589
Score = 222 bits (112), Expect = 8e-58
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 651 agttccaaaacacgcgataacagtcttatgaatggtttccactaaatccttggaaaaaag 710
|||||||||||||||||||||||||||||||| ||| ||||||| ||||||| |||||||
Sbjct: 6569 agttccaaaacacgcgataacagtcttatgaagggtctccactacatccttgaaaaaaag 6510
Query: 711 tatattcctgctccctttacattcacatatatatacttgaaaattcacatcaaatatggg 770
||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 6509 actatccctgctccctttacattcacatatatatacttgaaaatacacataaaatatggg 6450
Query: 771 tggacaatcacagataaaatgaccagttagttatct 806
||||||||||| |||||||||||||||||||||||
Sbjct: 6449 aggacaatcacaaataaaatgaccagttagttatct 6414
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,119
Number of Sequences: 1807
Number of extensions: 15119
Number of successful extensions: 149
Number of sequences better than 1.0e-20: 2
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)